PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.6G121500.1.p
Common NameLOC101761798, SETIT_014152mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family G2-like
Protein Properties Length: 303aa    MW: 33130.8 Da    PI: 6.3758
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.6G121500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.62.7e-334397155
             G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                        ++rlrWt+eLH+rFveav+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Seita.6G121500.1.p 43 RQRLRWTNELHDRFVEAVTQLGGPDRATPKGVLRIMGVPGLTIYHVKSHLQKYRL 97
                        58****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.75740100IPR017930Myb domain
SuperFamilySSF466893.4E-184297IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-324298IPR009057Homeodomain-like
TIGRFAMsTIGR015575.1E-264498IPR006447Myb domain, plants
PfamPF002497.8E-94596IPR001005SANT/Myb domain
PfamPF143791.6E-23129175IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MYQPNPSIGP TQSNPAPHDQ MGPGDGAMVP HNGGNSNPNM AARQRLRWTN ELHDRFVEAV  60
TQLGGPDRAT PKGVLRIMGV PGLTIYHVKS HLQKYRLAKY IPDPSTDDNK AEKKDPGDLL  120
AALEGSSTMQ ISEALKLQME VQKRLHEQLE VQRQLQLRIE AQGKYLQKII EEQQRISGAG  180
ASRDTSSEQL PDSERTNPST PVPTSESPLQ AVPFSKDNGS RVEPMESASH DDLPHGEPVT  240
PDSNCRPGSP TLSPKHERAA KRQRGSSDGT PIADGDFALP HHIFESSTDS EFQQCSMPYS  300
SH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004973261.10.0PREDICTED: protein PHR1-LIKE 1-like
SwissprotQ8GUN56e-51PHL1_ARATH; Protein PHR1-LIKE 1
TrEMBLK3YIT30.0K3YIT3_SETIT; Uncharacterized protein
STRINGSi014152m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-81G2-like family protein